Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CiitaP79621 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.5□□□□□ -0.25
CiitaP79621 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.5□□□□□ -0.25
CiitaP79621 Gm13296-201ENSMUST00000117854 997 ntBASIC13.5□□□□□ -0.25
CiitaP79621 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CiitaP79621 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CiitaP79621 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Gm8913-201ENSMUST00000209491 641 ntBASIC13.5□□□□□ -0.25
CiitaP79621 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.5□□□□□ -0.25
CiitaP79621 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
CiitaP79621 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CiitaP79621 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CiitaP79621 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CiitaP79621 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 Gm9230-201ENSMUST00000188228 532 ntBASIC13.49□□□□□ -0.25
CiitaP79621 Gm18212-201ENSMUST00000211678 889 ntBASIC13.49□□□□□ -0.25
CiitaP79621 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.49□□□□□ -0.25
CiitaP79621 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.49□□□□□ -0.25
CiitaP79621 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.49□□□□□ -0.25
CiitaP79621 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.49□□□□□ -0.25
CiitaP79621 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CiitaP79621 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.48□□□□□ -0.25
CiitaP79621 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CiitaP79621 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.48□□□□□ -0.25
CiitaP79621 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CiitaP79621 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.48□□□□□ -0.25
CiitaP79621 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CiitaP79621 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CiitaP79621 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.48□□□□□ -0.25
CiitaP79621 Gm11439-201ENSMUST00000118598 409 ntBASIC13.48□□□□□ -0.25
CiitaP79621 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.48□□□□□ -0.25
CiitaP79621 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.48□□□□□ -0.25
CiitaP79621 Gm24990-201ENSMUST00000157406 323 ntBASIC13.48□□□□□ -0.25
CiitaP79621 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.48□□□□□ -0.25
CiitaP79621 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.48□□□□□ -0.25
CiitaP79621 Gm37466-201ENSMUST00000195692 652 ntBASIC13.48□□□□□ -0.25
CiitaP79621 Gm44262-201ENSMUST00000204969 372 ntBASIC13.48□□□□□ -0.25
CiitaP79621 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms