Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Gm5187-201ENSMUST00000117317 991 ntBASIC12.4□□□□□ -0.42
Ldb1P70662 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.4□□□□□ -0.42
Ldb1P70662 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.4□□□□□ -0.42
Ldb1P70662 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.4□□□□□ -0.42
Ldb1P70662 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.4□□□□□ -0.42
Ldb1P70662 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.4□□□□□ -0.42
Ldb1P70662 Gm44405-201ENSMUST00000198952 126 ntBASIC12.4□□□□□ -0.42
Ldb1P70662 Gm44124-201ENSMUST00000204159 472 ntBASIC12.4□□□□□ -0.42
Ldb1P70662 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.4□□□□□ -0.42
Ldb1P70662 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.4□□□□□ -0.42
Ldb1P70662 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ldb1P70662 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ldb1P70662 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ldb1P70662 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ldb1P70662 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ldb1P70662 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ldb1P70662 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ldb1P70662 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ldb1P70662 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ldb1P70662 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.39□□□□□ -0.43
Ldb1P70662 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ldb1P70662 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm8018-201ENSMUST00000173536 789 ntBASIC12.39□□□□□ -0.43
Ldb1P70662 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm9630-201ENSMUST00000178304 885 ntBASIC12.39□□□□□ -0.43
Ldb1P70662 Mir7085-201ENSMUST00000184353 66 ntBASIC12.39□□□□□ -0.43
Ldb1P70662 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.39□□□□□ -0.43
Ldb1P70662 Gm5781-201ENSMUST00000219792 443 ntBASIC12.39□□□□□ -0.43
Ldb1P70662 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.39□□□□□ -0.43
Ldb1P70662 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ldb1P70662 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ldb1P70662 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ldb1P70662 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.38□□□□□ -0.43
Ldb1P70662 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 Gm13316-201ENSMUST00000140537 691 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Snora78-201ENSMUST00000158630 128 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 Gm27243-201ENSMUST00000183964 521 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.38□□□□□ -0.43
Ldb1P70662 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Ldb1P70662 Gm9823-201ENSMUST00000051212 327 ntBASIC12.38□□□□□ -0.43
Ldb1P70662 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ldb1P70662 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms