Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.75□□□□□ -0.21
Hmgb1P63158 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgb1P63158 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hmgb1P63158 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hmgb1P63158 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb1P63158 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb1P63158 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb1P63158 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Gm11478-201ENSMUST00000117851 599 ntBASIC13.74□□□□□ -0.21
Hmgb1P63158 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.74□□□□□ -0.21
Hmgb1P63158 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hmgb1P63158 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hmgb1P63158 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb1P63158 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.74□□□□□ -0.21
Hmgb1P63158 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Hmgb1P63158 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb1P63158 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Gm7063-201ENSMUST00000186840 981 ntBASIC13.73□□□□□ -0.21
Hmgb1P63158 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hmgb1P63158 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.73□□□□□ -0.21
Hmgb1P63158 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Gm8227-201ENSMUST00000223306 571 ntBASIC13.73□□□□□ -0.21
Hmgb1P63158 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Gm10268-201ENSMUST00000085340 555 ntBASIC13.73□□□□□ -0.21
Hmgb1P63158 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb1P63158 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb1P63158 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms