Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.25□□□□□ -0.45
Lhx1P63006 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lhx1P63006 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lhx1P63006 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm24934-201ENSMUST00000103764 111 ntBASIC12.25□□□□□ -0.45
Lhx1P63006 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm15236-201ENSMUST00000117309 379 ntBASIC12.25□□□□□ -0.45
Lhx1P63006 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.25□□□□□ -0.45
Lhx1P63006 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.25□□□□□ -0.45
Lhx1P63006 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.25□□□□□ -0.45
Lhx1P63006 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.25□□□□□ -0.45
Lhx1P63006 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.25□□□□□ -0.45
Lhx1P63006 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lhx1P63006 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Gm14130-201ENSMUST00000118417 987 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm6963-201ENSMUST00000147879 379 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm26361-201ENSMUST00000158868 186 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm9630-201ENSMUST00000178304 885 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Rprl1-202ENSMUST00000198476 238 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.24□□□□□ -0.45
Lhx1P63006 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lhx1P63006 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm9996-201ENSMUST00000070359 913 ntBASIC12.24□□□□□ -0.45
Lhx1P63006 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Lhx1P63006 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.24□□□□□ -0.45
Lhx1P63006 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lhx1P63006 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lhx1P63006 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.23□□□□□ -0.45
Lhx1P63006 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Lhx1P63006 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Lhx1P63006 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx1P63006 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms