Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm12490-201ENSMUST00000120255 560 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Mir7654-201ENSMUST00000185082 70 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm44397-201ENSMUST00000195950 113 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.08□□□□□ -0.64
Sf3b6P59708 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm9908-201ENSMUST00000211534 448 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm6983-201ENSMUST00000214912 628 ntBASIC11.08□□□□□ -0.64
Sf3b6P59708 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sf3b6P59708 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3b6P59708 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm24231-201ENSMUST00000104315 133 ntBASIC11.07□□□□□ -0.64
Sf3b6P59708 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm5745-201ENSMUST00000183748 313 ntBASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.07□□□□□ -0.64
Sf3b6P59708 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.07□□□□□ -0.64
Sf3b6P59708 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.07□□□□□ -0.64
Sf3b6P59708 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.07□□□□□ -0.64
Sf3b6P59708 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sf3b6P59708 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3b6P59708 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.06□□□□□ -0.64
Sf3b6P59708 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.06□□□□□ -0.64
Sf3b6P59708 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.06□□□□□ -0.64
Sf3b6P59708 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3b6P59708 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Sf3b6P59708 Gm11478-201ENSMUST00000117851 599 ntBASIC11.06□□□□□ -0.64
Sf3b6P59708 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.06□□□□□ -0.64
Sf3b6P59708 Gm14704-201ENSMUST00000120300 874 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms