Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Msh6P54276 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Gm14460-201ENSMUST00000121511 639 ntBASIC15.71■□□□□ 0.11
Msh6P54276 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.71■□□□□ 0.11
Msh6P54276 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.71■□□□□ 0.11
Msh6P54276 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.71■□□□□ 0.11
Msh6P54276 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.71■□□□□ 0.11
Msh6P54276 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh6P54276 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh6P54276 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh6P54276 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Msh6P54276 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Msh6P54276 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh6P54276 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.71■□□□□ 0.1
Msh6P54276 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Msh6P54276 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.7■□□□□ 0.1
Msh6P54276 Gm25881-201ENSMUST00000157783 103 ntBASIC15.7■□□□□ 0.1
Msh6P54276 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.7■□□□□ 0.1
Msh6P54276 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.7■□□□□ 0.1
Msh6P54276 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.7■□□□□ 0.1
Msh6P54276 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Msh6P54276 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.7■□□□□ 0.1
Msh6P54276 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.7■□□□□ 0.1
Msh6P54276 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh6P54276 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.69■□□□□ 0.1
Msh6P54276 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.69■□□□□ 0.1
Msh6P54276 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Gm23596-201ENSMUST00000104304 132 ntBASIC15.69■□□□□ 0.1
Msh6P54276 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.69■□□□□ 0.1
Msh6P54276 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.69■□□□□ 0.1
Msh6P54276 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Ginm1-202ENSMUST00000065124 300 ntBASIC15.69■□□□□ 0.1
Msh6P54276 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Msh6P54276 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Msh6P54276 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.69■□□□□ 0.1
Msh6P54276 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Msh6P54276 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msh6P54276 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.68■□□□□ 0.1
Msh6P54276 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Msh6P54276 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Msh6P54276 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msh6P54276 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Msh6P54276 Gm13888-201ENSMUST00000119148 422 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms