Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdx1P52946 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm6334-201ENSMUST00000207083 228 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Gm6007-201ENSMUST00000208170 823 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm10076-201ENSMUST00000073238 384 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pdx1P52946 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Pdx1P52946 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdx1P52946 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdx1P52946 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.33□□□□□ -0.44
Pdx1P52946 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdx1P52946 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pdx1P52946 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Pdx1P52946 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pdx1P52946 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pdx1P52946 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm25214-201ENSMUST00000104573 129 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm11531-201ENSMUST00000117614 555 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm25043-201ENSMUST00000158604 212 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Gm9630-201ENSMUST00000178304 885 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm5950-201ENSMUST00000213337 772 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.32□□□□□ -0.44
Pdx1P52946 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdx1P52946 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Pdx1P52946 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.32□□□□□ -0.44
Pdx1P52946 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pdx1P52946 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.31□□□□□ -0.44
Pdx1P52946 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.31□□□□□ -0.44
Pdx1P52946 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.31□□□□□ -0.44
Pdx1P52946 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.31□□□□□ -0.44
Pdx1P52946 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms