Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Brca1P48754 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.74□□□□□ -0.21
Brca1P48754 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Brca1P48754 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Brca1P48754 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Brca1P48754 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.74□□□□□ -0.21
Brca1P48754 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.74□□□□□ -0.21
Brca1P48754 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.74□□□□□ -0.21
Brca1P48754 Gm18201-201ENSMUST00000174735 875 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Gm8531-201ENSMUST00000188319 893 ntBASIC13.74□□□□□ -0.21
Brca1P48754 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.74□□□□□ -0.21
Brca1P48754 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Brca1P48754 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Brca1P48754 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.73□□□□□ -0.21
Brca1P48754 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.73□□□□□ -0.21
Brca1P48754 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Brca1P48754 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.73□□□□□ -0.21
Brca1P48754 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.73□□□□□ -0.21
Brca1P48754 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.73□□□□□ -0.21
Brca1P48754 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Gm13549-201ENSMUST00000118339 796 ntBASIC13.73□□□□□ -0.21
Brca1P48754 Gm15004-201ENSMUST00000119192 630 ntBASIC13.73□□□□□ -0.21
Brca1P48754 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Brca1P48754 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.73□□□□□ -0.21
Brca1P48754 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.73□□□□□ -0.21
Brca1P48754 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brca1P48754 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.72□□□□□ -0.21
Brca1P48754 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.72□□□□□ -0.21
Brca1P48754 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.72□□□□□ -0.21
Brca1P48754 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Gm9192-201ENSMUST00000183221 985 ntBASIC13.72□□□□□ -0.21
Brca1P48754 Gm5298-201ENSMUST00000201122 892 ntBASIC13.72□□□□□ -0.21
Brca1P48754 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Brca1P48754 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.72□□□□□ -0.21
Brca1P48754 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Brca1P48754 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.72□□□□□ -0.21
Brca1P48754 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.72□□□□□ -0.21
Brca1P48754 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Brca1P48754 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms