Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.67□□□□□ -0.54
Sox2P48432 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox2P48432 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Sox2P48432 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox2P48432 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox2P48432 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm13123-201ENSMUST00000122173 492 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm23363-201ENSMUST00000175024 79 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Sox2P48432 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.66□□□□□ -0.54
Sox2P48432 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox2P48432 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox2P48432 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.66□□□□□ -0.54
Sox2P48432 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox2P48432 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox2P48432 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox2P48432 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox2P48432 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox2P48432 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox2P48432 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Sox2P48432 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Sox2P48432 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.65□□□□□ -0.54
Sox2P48432 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox2P48432 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms