Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rfx3P48381 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.28□□□□□ -0.6
Rfx3P48381 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Rfx3P48381 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.28□□□□□ -0.6
Rfx3P48381 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.28□□□□□ -0.6
Rfx3P48381 Mir339-201ENSMUST00000083659 96 ntBASIC11.28□□□□□ -0.6
Rfx3P48381 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfx3P48381 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfx3P48381 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rfx3P48381 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rfx3P48381 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rfx3P48381 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.27□□□□□ -0.61
Rfx3P48381 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.27□□□□□ -0.61
Rfx3P48381 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.27□□□□□ -0.61
Rfx3P48381 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rfx3P48381 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm14704-201ENSMUST00000120300 874 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm8099-201ENSMUST00000200510 742 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm10146-201ENSMUST00000072739 309 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.27□□□□□ -0.61
Rfx3P48381 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rfx3P48381 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.27□□□□□ -0.61
Rfx3P48381 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rfx3P48381 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfx3P48381 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rfx3P48381 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rfx3P48381 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.27□□□□□ -0.61
Rfx3P48381 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.26□□□□□ -0.61
Rfx3P48381 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.26□□□□□ -0.61
Rfx3P48381 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms