Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm8227-201ENSMUST00000223306 571 ntBASIC14.87□□□□□ -0.03
Rfx1P48377 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.87□□□□□ -0.03
Rfx1P48377 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rfx1P48377 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.87□□□□□ -0.03
Rfx1P48377 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.87□□□□□ -0.03
Rfx1P48377 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rfx1P48377 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.87□□□□□ -0.03
Rfx1P48377 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx1P48377 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Rfx1P48377 Gm14057-201ENSMUST00000120631 482 ntBASIC14.86□□□□□ -0.03
Rfx1P48377 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.86□□□□□ -0.03
Rfx1P48377 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Gm17208-201ENSMUST00000168388 535 ntBASIC14.86□□□□□ -0.03
Rfx1P48377 Gm23363-201ENSMUST00000175024 79 ntBASIC14.86□□□□□ -0.03
Rfx1P48377 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.86□□□□□ -0.03
Rfx1P48377 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.86□□□□□ -0.03
Rfx1P48377 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rfx1P48377 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Rfx1P48377 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rfx1P48377 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx1P48377 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rfx1P48377 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.85□□□□□ -0.03
Rfx1P48377 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rfx1P48377 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rfx1P48377 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rfx1P48377 Gm12859-201ENSMUST00000117834 427 ntBASIC14.85□□□□□ -0.03
Rfx1P48377 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.85□□□□□ -0.03
Rfx1P48377 Gm16479-201ENSMUST00000121706 932 ntBASIC14.85□□□□□ -0.03
Rfx1P48377 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.85□□□□□ -0.03
Rfx1P48377 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.85□□□□□ -0.03
Rfx1P48377 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Gm22121-201ENSMUST00000175148 54 ntBASIC14.85□□□□□ -0.03
Rfx1P48377 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.85□□□□□ -0.03
Rfx1P48377 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.85□□□□□ -0.03
Rfx1P48377 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.85□□□□□ -0.03
Rfx1P48377 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx1P48377 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfx1P48377 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rfx1P48377 Snord83b-201ENSMUST00000104546 94 ntBASIC14.84□□□□□ -0.03
Rfx1P48377 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfx1P48377 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfx1P48377 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx1P48377 Proscos-202ENSMUST00000178990 666 ntBASIC14.84□□□□□ -0.03
Rfx1P48377 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms