Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.19□□□□□ -0.46
Gli1P47806 Gm44124-201ENSMUST00000204159 472 ntBASIC12.19□□□□□ -0.46
Gli1P47806 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.19□□□□□ -0.46
Gli1P47806 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.19□□□□□ -0.46
Gli1P47806 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gli1P47806 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gli1P47806 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gli1P47806 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gli1P47806 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Gli1P47806 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gli1P47806 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.18□□□□□ -0.46
Gli1P47806 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.18□□□□□ -0.46
Gli1P47806 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Gm27501-201ENSMUST00000183599 107 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Mir8109-201ENSMUST00000184375 117 ntBASIC12.18□□□□□ -0.46
Gli1P47806 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Gm44364-201ENSMUST00000198368 141 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Gm18056-201ENSMUST00000207670 568 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Gm18061-201ENSMUST00000208350 562 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Gm18063-201ENSMUST00000208529 568 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Gm18052-201ENSMUST00000208750 559 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.18□□□□□ -0.46
Gli1P47806 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.18□□□□□ -0.46
Gli1P47806 Gm19309-201ENSMUST00000218295 205 ntBASIC12.18□□□□□ -0.46
Gli1P47806 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.18□□□□□ -0.46
Gli1P47806 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Gm24526-201ENSMUST00000082921 158 ntBASIC12.18□□□□□ -0.46
Gli1P47806 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gli1P47806 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.18□□□□□ -0.46
Gli1P47806 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Gli1P47806 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gli1P47806 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gli1P47806 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.17□□□□□ -0.46
Gli1P47806 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Gli1P47806 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.17□□□□□ -0.46
Gli1P47806 Gm8213-201ENSMUST00000118191 441 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Gm12203-201ENSMUST00000118235 598 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Gm12209-201ENSMUST00000120089 596 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Gm13813-201ENSMUST00000120998 787 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms