Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Msh2P43247 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msh2P43247 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msh2P43247 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msh2P43247 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Msh2P43247 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Gm11425-201ENSMUST00000119608 498 ntBASIC12.85□□□□□ -0.35
Msh2P43247 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.85□□□□□ -0.35
Msh2P43247 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Gm10146-201ENSMUST00000072739 309 ntBASIC12.85□□□□□ -0.35
Msh2P43247 Gm9396-201ENSMUST00000076703 567 ntBASIC12.85□□□□□ -0.35
Msh2P43247 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.85□□□□□ -0.35
Msh2P43247 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Msh2P43247 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh2P43247 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Msh2P43247 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Gm14127-201ENSMUST00000117906 678 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Gm16177-201ENSMUST00000120728 718 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Gm43818-201ENSMUST00000200605 466 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Gm42599-201ENSMUST00000201308 469 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.84□□□□□ -0.35
Msh2P43247 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msh2P43247 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh2P43247 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Msh2P43247 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Msh2P43247 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.83□□□□□ -0.36
Msh2P43247 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh2P43247 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh2P43247 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh2P43247 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Msh2P43247 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms