Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HttP42859 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.86□□□□□ -0.35
HttP42859 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
HttP42859 Gm15615-201ENSMUST00000118876 198 ntBASIC12.86□□□□□ -0.35
HttP42859 Gm14395-201ENSMUST00000120494 563 ntBASIC12.86□□□□□ -0.35
HttP42859 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.86□□□□□ -0.35
HttP42859 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.86□□□□□ -0.35
HttP42859 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.86□□□□□ -0.35
HttP42859 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HttP42859 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.85□□□□□ -0.35
HttP42859 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HttP42859 Gm14760-201ENSMUST00000121831 999 ntBASIC12.85□□□□□ -0.35
HttP42859 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.85□□□□□ -0.35
HttP42859 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HttP42859 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.85□□□□□ -0.35
HttP42859 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.85□□□□□ -0.35
HttP42859 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.85□□□□□ -0.35
HttP42859 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.85□□□□□ -0.35
HttP42859 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HttP42859 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HttP42859 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.85□□□□□ -0.35
HttP42859 Gm6108-201ENSMUST00000208365 367 ntBASIC12.85□□□□□ -0.35
HttP42859 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.85□□□□□ -0.35
HttP42859 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.85□□□□□ -0.35
HttP42859 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HttP42859 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HttP42859 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Gm7940-201ENSMUST00000218195 769 ntBASIC12.84□□□□□ -0.35
HttP42859 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.84□□□□□ -0.35
HttP42859 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.84□□□□□ -0.35
HttP42859 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
HttP42859 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.84□□□□□ -0.35
HttP42859 BC080696-201ENSMUST00000202858 1218 ntBASIC12.84□□□□□ -0.35
HttP42859 Gm6423-201ENSMUST00000204315 934 ntBASIC12.84□□□□□ -0.35
HttP42859 Gm17825-201ENSMUST00000206836 794 ntBASIC12.84□□□□□ -0.35
HttP42859 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HttP42859 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.84□□□□□ -0.35
HttP42859 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HttP42859 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HttP42859 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.83□□□□□ -0.35
HttP42859 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.83□□□□□ -0.35
HttP42859 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.83□□□□□ -0.35
HttP42859 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HttP42859 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.83□□□□□ -0.36
HttP42859 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HttP42859 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HttP42859 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms