Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TfamP40630 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.07□□□□□ -0.48
TfamP40630 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TfamP40630 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.07□□□□□ -0.48
TfamP40630 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TfamP40630 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.07□□□□□ -0.48
TfamP40630 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.07□□□□□ -0.48
TfamP40630 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TfamP40630 Gm38092-201ENSMUST00000195600 653 ntBASIC12.07□□□□□ -0.48
TfamP40630 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Gm24526-201ENSMUST00000082921 158 ntBASIC12.07□□□□□ -0.48
TfamP40630 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TfamP40630 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.06□□□□□ -0.48
TfamP40630 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TfamP40630 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TfamP40630 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.06□□□□□ -0.48
TfamP40630 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.06□□□□□ -0.48
TfamP40630 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.06□□□□□ -0.48
TfamP40630 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.06□□□□□ -0.48
TfamP40630 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.06□□□□□ -0.48
TfamP40630 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.06□□□□□ -0.48
TfamP40630 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
TfamP40630 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TfamP40630 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TfamP40630 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.05□□□□□ -0.48
TfamP40630 Cog3-203ENSMUST00000227473 4197 ntBASIC12.05□□□□□ -0.48
TfamP40630 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
TfamP40630 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TfamP40630 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TfamP40630 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
TfamP40630 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Gm24231-201ENSMUST00000104315 133 ntBASIC12.05□□□□□ -0.48
TfamP40630 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.05□□□□□ -0.48
TfamP40630 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.05□□□□□ -0.48
TfamP40630 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TfamP40630 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms