Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm14219-201ENSMUST00000120414 288 ntBASIC12.79□□□□□ -0.36
Cxcl12P40224 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm15595-201ENSMUST00000120840 961 ntBASIC12.79□□□□□ -0.36
Cxcl12P40224 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm20392-201ENSMUST00000173047 701 ntBASIC12.79□□□□□ -0.36
Cxcl12P40224 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm26013-201ENSMUST00000104404 119 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm13916-201ENSMUST00000117368 628 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm13937-201ENSMUST00000121000 988 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm11980-201ENSMUST00000121445 986 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm28388-201ENSMUST00000186262 437 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm42657-201ENSMUST00000201746 211 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Mir483-201ENSMUST00000093631 73 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.78□□□□□ -0.36
Cxcl12P40224 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.78□□□□□ -0.36
Cxcl12P40224 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcl12P40224 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cxcl12P40224 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cxcl12P40224 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcl12P40224 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm24231-201ENSMUST00000104315 133 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm7722-201ENSMUST00000120646 741 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.77□□□□□ -0.37
Cxcl12P40224 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cxcl12P40224 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm45575-201ENSMUST00000210283 548 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms