Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LdlrP35951 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.42□□□□□ -0.42
LdlrP35951 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LdlrP35951 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Rubie-203ENSMUST00000227803 2430 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
LdlrP35951 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Map1b-203ENSMUST00000223725 2669 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Gm10156-201ENSMUST00000122364 462 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.41□□□□□ -0.42
LdlrP35951 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Gm8810-201ENSMUST00000172895 754 ntBASIC12.41□□□□□ -0.42
LdlrP35951 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Gm27243-201ENSMUST00000183964 521 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Gm38002-201ENSMUST00000193255 180 ntBASIC12.41□□□□□ -0.42
LdlrP35951 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Gm43822-201ENSMUST00000200285 476 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Gm29705-201ENSMUST00000212598 474 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Gm9823-201ENSMUST00000051212 327 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
LdlrP35951 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.41□□□□□ -0.42
LdlrP35951 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LdlrP35951 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
LdlrP35951 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LdlrP35951 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.4□□□□□ -0.42
LdlrP35951 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LdlrP35951 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LdlrP35951 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
LdlrP35951 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.4□□□□□ -0.42
LdlrP35951 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Gm4857-201ENSMUST00000192718 785 ntBASIC12.4□□□□□ -0.42
LdlrP35951 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.4□□□□□ -0.42
LdlrP35951 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LdlrP35951 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.4□□□□□ -0.42
LdlrP35951 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
LdlrP35951 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LdlrP35951 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms