Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm7029-201ENSMUST00000173226 450 ntBASIC13.6□□□□□ -0.23
Sox5P35710 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Sox5P35710 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Sox5P35710 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sox5P35710 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Sox5P35710 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.6□□□□□ -0.23
Sox5P35710 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox5P35710 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox5P35710 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox5P35710 Gm22331-201ENSMUST00000158066 136 ntBASIC13.59□□□□□ -0.23
Sox5P35710 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Gm27243-201ENSMUST00000183964 521 ntBASIC13.59□□□□□ -0.23
Sox5P35710 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox5P35710 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.59□□□□□ -0.23
Sox5P35710 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.59□□□□□ -0.23
Sox5P35710 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox5P35710 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox5P35710 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Sox5P35710 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox5P35710 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox5P35710 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox5P35710 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox5P35710 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Sox5P35710 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Mir1894-201ENSMUST00000122802 81 ntBASIC13.58□□□□□ -0.24
Sox5P35710 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.58□□□□□ -0.24
Sox5P35710 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Gm4271-201ENSMUST00000174444 973 ntBASIC13.58□□□□□ -0.24
Sox5P35710 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.58□□□□□ -0.24
Sox5P35710 Gm44882-201ENSMUST00000205702 802 ntBASIC13.58□□□□□ -0.24
Sox5P35710 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.58□□□□□ -0.24
Sox5P35710 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.58□□□□□ -0.24
Sox5P35710 Gm29705-201ENSMUST00000212598 474 ntBASIC13.58□□□□□ -0.24
Sox5P35710 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Sox5P35710 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox5P35710 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sox5P35710 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox5P35710 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox5P35710 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 179.8 ms