Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Mmp13P33435 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Mmp13P33435 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Mmp13P33435 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Mmp13P33435 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm14921-201ENSMUST00000118643 908 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Gm14760-201ENSMUST00000121831 999 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Gm8062-201ENSMUST00000139696 444 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm17420-201ENSMUST00000164753 153 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Mmp13P33435 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.76□□□□□ -0.37
Mmp13P33435 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp13P33435 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.76□□□□□ -0.37
Mmp13P33435 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Gm16479-201ENSMUST00000121706 932 ntBASIC12.75□□□□□ -0.37
Mmp13P33435 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.75□□□□□ -0.37
Mmp13P33435 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.75□□□□□ -0.37
Mmp13P33435 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Gm27682-201ENSMUST00000183930 110 ntBASIC12.75□□□□□ -0.37
Mmp13P33435 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.75□□□□□ -0.37
Mmp13P33435 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.75□□□□□ -0.37
Mmp13P33435 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.75□□□□□ -0.37
Mmp13P33435 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Mmp13P33435 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp13P33435 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.75□□□□□ -0.37
Mmp13P33435 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms