Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Col8a2P25318 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Gm11930-201ENSMUST00000117788 190 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Gm28882-201ENSMUST00000185504 314 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Gm38317-201ENSMUST00000195564 343 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.4□□□□□ -0.74
Col8a2P25318 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.4□□□□□ -0.74
Col8a2P25318 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Col8a2P25318 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Col8a2P25318 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.4□□□□□ -0.75
Col8a2P25318 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.4□□□□□ -0.75
Col8a2P25318 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Col8a2P25318 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Col8a2P25318 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Col8a2P25318 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col8a2P25318 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.39□□□□□ -0.75
Col8a2P25318 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Col8a2P25318 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Col8a2P25318 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.39□□□□□ -0.75
Col8a2P25318 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Col8a2P25318 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Col8a2P25318 Gm12314-201ENSMUST00000118104 538 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Gm25668-201ENSMUST00000157700 129 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm5070-201ENSMUST00000177599 862 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm27046-201ENSMUST00000182160 463 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm3096-201ENSMUST00000185770 364 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm7003-201ENSMUST00000195089 312 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Col8a2P25318 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Col8a2P25318 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.39□□□□□ -0.75
Col8a2P25318 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col8a2P25318 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.38□□□□□ -0.75
Col8a2P25318 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.38□□□□□ -0.75
Col8a2P25318 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col8a2P25318 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.38□□□□□ -0.75
Col8a2P25318 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms