Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pde6bP23440 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.66□□□□□ -0.22
Pde6bP23440 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pde6bP23440 Gm8018-201ENSMUST00000173536 789 ntBASIC13.66□□□□□ -0.22
Pde6bP23440 Mir5120-201ENSMUST00000175020 78 ntBASIC13.66□□□□□ -0.22
Pde6bP23440 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.66□□□□□ -0.22
Pde6bP23440 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.66□□□□□ -0.22
Pde6bP23440 Gm18041-201ENSMUST00000218210 618 ntBASIC13.66□□□□□ -0.22
Pde6bP23440 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Gm10312-201ENSMUST00000078515 489 ntBASIC13.66□□□□□ -0.22
Pde6bP23440 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pde6bP23440 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.65□□□□□ -0.22
Pde6bP23440 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Pde6bP23440 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pde6bP23440 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pde6bP23440 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Pde6bP23440 Mir3547-201ENSMUST00000175461 88 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 Gm25700-201ENSMUST00000177693 110 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.65□□□□□ -0.22
Pde6bP23440 Gm44262-201ENSMUST00000204969 372 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.65□□□□□ -0.22
Pde6bP23440 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Pde6bP23440 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.65□□□□□ -0.22
Pde6bP23440 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.65□□□□□ -0.22
Pde6bP23440 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.65□□□□□ -0.22
Pde6bP23440 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pde6bP23440 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pde6bP23440 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pde6bP23440 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
Pde6bP23440 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Pde6bP23440 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Pde6bP23440 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pde6bP23440 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.64□□□□□ -0.23
Pde6bP23440 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pde6bP23440 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pde6bP23440 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Pck2-205ENSMUST00000226352 2784 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.64□□□□□ -0.23
Pde6bP23440 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.64□□□□□ -0.23
Pde6bP23440 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.64□□□□□ -0.23
Pde6bP23440 Gm7857-201ENSMUST00000117957 358 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Gm12217-201ENSMUST00000118858 696 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pde6bP23440 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.64□□□□□ -0.23
Pde6bP23440 Mir6979-201ENSMUST00000183927 56 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Mir6927-201ENSMUST00000184494 71 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.64□□□□□ -0.23
Pde6bP23440 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pde6bP23440 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Gm8385-201ENSMUST00000058999 643 ntBASIC13.64□□□□□ -0.23
Pde6bP23440 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pde6bP23440 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms