Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Kcna1P16388 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Kcna1P16388 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Kcna1P16388 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Kcna1P16388 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Kcna1P16388 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Kcna1P16388 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Kcna1P16388 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.14□□□□□ -0.15
Kcna1P16388 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm24830-201ENSMUST00000102024 166 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm15808-201ENSMUST00000119046 604 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm25890-201ENSMUST00000177643 165 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm22614-201ENSMUST00000178300 165 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm27046-201ENSMUST00000182160 463 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.14□□□□□ -0.15
Kcna1P16388 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm22042-201ENSMUST00000082989 165 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm26232-201ENSMUST00000083360 166 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Gm26110-201ENSMUST00000083971 165 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.14□□□□□ -0.15
Kcna1P16388 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Kcna1P16388 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Kcna1P16388 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.14□□□□□ -0.15
Kcna1P16388 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.13□□□□□ -0.15
Kcna1P16388 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.13□□□□□ -0.15
Kcna1P16388 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Kcna1P16388 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Kcna1P16388 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.13□□□□□ -0.15
Kcna1P16388 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Kcna1P16388 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.13□□□□□ -0.15
Kcna1P16388 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.13□□□□□ -0.15
Kcna1P16388 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.13□□□□□ -0.15
Kcna1P16388 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.13□□□□□ -0.15
Kcna1P16388 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.13□□□□□ -0.15
Kcna1P16388 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.13□□□□□ -0.15
Kcna1P16388 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.13□□□□□ -0.15
Kcna1P16388 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.13□□□□□ -0.15
Kcna1P16388 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.13□□□□□ -0.15
Kcna1P16388 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Kcna1P16388 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Kcna1P16388 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms