Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.29□□□□□ -0.6
TpbpaP13438 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TpbpaP13438 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TpbpaP13438 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
TpbpaP13438 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TpbpaP13438 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.28□□□□□ -0.6
TpbpaP13438 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.28□□□□□ -0.6
TpbpaP13438 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
TpbpaP13438 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.28□□□□□ -0.6
TpbpaP13438 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.28□□□□□ -0.6
TpbpaP13438 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.28□□□□□ -0.6
TpbpaP13438 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.28□□□□□ -0.6
TpbpaP13438 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.28□□□□□ -0.6
TpbpaP13438 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
TpbpaP13438 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TpbpaP13438 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.28□□□□□ -0.6
TpbpaP13438 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TpbpaP13438 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.27□□□□□ -0.6
TpbpaP13438 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.27□□□□□ -0.6
TpbpaP13438 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Rgr-203ENSMUST00000225070 4704 ntBASIC11.27□□□□□ -0.6
TpbpaP13438 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TpbpaP13438 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.27□□□□□ -0.61
TpbpaP13438 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
TpbpaP13438 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Gm26185-201ENSMUST00000157692 266 ntBASIC11.27□□□□□ -0.61
TpbpaP13438 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.27□□□□□ -0.61
TpbpaP13438 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TpbpaP13438 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TpbpaP13438 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TpbpaP13438 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
TpbpaP13438 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TpbpaP13438 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TpbpaP13438 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TpbpaP13438 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TpbpaP13438 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TpbpaP13438 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms