Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.97□□□□□ -0.49
Cntn1P12960 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cntn1P12960 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cntn1P12960 Gm10076-201ENSMUST00000073238 384 ntBASIC11.97□□□□□ -0.49
Cntn1P12960 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cntn1P12960 Gm22042-201ENSMUST00000082989 165 ntBASIC11.97□□□□□ -0.49
Cntn1P12960 Gm26232-201ENSMUST00000083360 166 ntBASIC11.97□□□□□ -0.49
Cntn1P12960 Gm24136-201ENSMUST00000083374 165 ntBASIC11.97□□□□□ -0.49
Cntn1P12960 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.97□□□□□ -0.49
Cntn1P12960 Gm26110-201ENSMUST00000083971 165 ntBASIC11.97□□□□□ -0.49
Cntn1P12960 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cntn1P12960 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cntn1P12960 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.97□□□□□ -0.49
Cntn1P12960 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cntn1P12960 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cntn1P12960 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.97□□□□□ -0.49
Cntn1P12960 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cntn1P12960 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cntn1P12960 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.96□□□□□ -0.49
Cntn1P12960 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cntn1P12960 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Cntn1P12960 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.96□□□□□ -0.49
Cntn1P12960 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Cntn1P12960 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.96□□□□□ -0.49
Cntn1P12960 Gm44967-201ENSMUST00000207047 631 ntBASIC11.96□□□□□ -0.49
Cntn1P12960 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.96□□□□□ -0.49
Cntn1P12960 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.96□□□□□ -0.49
Cntn1P12960 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cntn1P12960 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.96□□□□□ -0.49
Cntn1P12960 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.96□□□□□ -0.49
Cntn1P12960 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cntn1P12960 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.96□□□□□ -0.5
Cntn1P12960 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cntn1P12960 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Cntn1P12960 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cntn1P12960 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cntn1P12960 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.95□□□□□ -0.5
Cntn1P12960 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.95□□□□□ -0.5
Cntn1P12960 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cntn1P12960 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cntn1P12960 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.95□□□□□ -0.5
Cntn1P12960 Gm12314-201ENSMUST00000118104 538 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Gm14109-201ENSMUST00000118814 309 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Gm15276-201ENSMUST00000145953 498 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Gm24845-201ENSMUST00000158034 109 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.95□□□□□ -0.5
Cntn1P12960 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Gm38317-201ENSMUST00000195564 343 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms