Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Ccl1P10146 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ccl1P10146 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.64□□□□□ -0.87
Ccl1P10146 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccl1P10146 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.64□□□□□ -0.87
Ccl1P10146 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.64□□□□□ -0.87
Ccl1P10146 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.64□□□□□ -0.87
Ccl1P10146 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.64□□□□□ -0.87
Ccl1P10146 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Ccl1P10146 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccl1P10146 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.64□□□□□ -0.87
Ccl1P10146 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccl1P10146 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Mir449b-201ENSMUST00000104833 80 ntBASIC9.63□□□□□ -0.87
Ccl1P10146 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.63□□□□□ -0.87
Ccl1P10146 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.63□□□□□ -0.87
Ccl1P10146 Gm11978-201ENSMUST00000122315 466 ntBASIC9.63□□□□□ -0.87
Ccl1P10146 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Gm26464-201ENSMUST00000157094 305 ntBASIC9.63□□□□□ -0.87
Ccl1P10146 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl1P10146 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.63□□□□□ -0.87
Ccl1P10146 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms