Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Map1b-203ENSMUST00000223725 2669 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Gm14704-201ENSMUST00000120300 874 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
UbbP0CG49 Mir6392-201ENSMUST00000184924 108 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Gm18624-201ENSMUST00000220966 658 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Gm8227-201ENSMUST00000223306 571 ntBASIC10.85□□□□□ -0.67
UbbP0CG49 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.85□□□□□ -0.67
UbbP0CG49 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UbbP0CG49 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
UbbP0CG49 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm12928-201ENSMUST00000117115 573 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.84□□□□□ -0.67
UbbP0CG49 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
UbbP0CG49 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms