Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h2P0C090 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Gm7857-201ENSMUST00000117957 358 ntBASIC12.73□□□□□ -0.37
Rc3h2P0C090 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Mir5120-201ENSMUST00000175020 78 ntBASIC12.73□□□□□ -0.37
Rc3h2P0C090 Gm8913-201ENSMUST00000209491 641 ntBASIC12.73□□□□□ -0.37
Rc3h2P0C090 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.73□□□□□ -0.37
Rc3h2P0C090 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Gm8385-201ENSMUST00000058999 643 ntBASIC12.73□□□□□ -0.37
Rc3h2P0C090 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.73□□□□□ -0.37
Rc3h2P0C090 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h2P0C090 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm14644-201ENSMUST00000116671 647 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm12217-201ENSMUST00000118858 696 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm9022-201ENSMUST00000182482 992 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm32999-201ENSMUST00000192693 562 ntBASIC12.72□□□□□ -0.37
Rc3h2P0C090 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h2P0C090 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms