Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TnfP06804 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TnfP06804 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TnfP06804 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TnfP06804 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TnfP06804 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.21□□□□□ -0.29
TnfP06804 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 Gm45433-201ENSMUST00000209386 247 ntBASIC13.21□□□□□ -0.29
TnfP06804 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.21□□□□□ -0.29
TnfP06804 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.21□□□□□ -0.29
TnfP06804 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TnfP06804 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TnfP06804 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TnfP06804 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.21□□□□□ -0.3
TnfP06804 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
TnfP06804 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TnfP06804 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TnfP06804 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TnfP06804 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.2□□□□□ -0.3
TnfP06804 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TnfP06804 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.2□□□□□ -0.3
TnfP06804 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.2□□□□□ -0.3
TnfP06804 Gm17812-201ENSMUST00000204935 318 ntBASIC13.2□□□□□ -0.3
TnfP06804 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.2□□□□□ -0.3
TnfP06804 Gm19994-201ENSMUST00000217086 586 ntBASIC13.2□□□□□ -0.3
TnfP06804 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.2□□□□□ -0.3
TnfP06804 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.2□□□□□ -0.3
TnfP06804 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.2□□□□□ -0.3
TnfP06804 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TnfP06804 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TnfP06804 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TnfP06804 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.2□□□□□ -0.3
TnfP06804 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.2□□□□□ -0.3
TnfP06804 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.2□□□□□ -0.3
TnfP06804 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms