Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdgfrbP05622 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PdgfrbP05622 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdgfrbP05622 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm8062-201ENSMUST00000139696 444 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm24548-201ENSMUST00000158650 108 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm9022-201ENSMUST00000182482 992 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.63□□□□□ -0.39
PdgfrbP05622 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm5186-201ENSMUST00000218781 920 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.63□□□□□ -0.39
PdgfrbP05622 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.63□□□□□ -0.39
PdgfrbP05622 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfrbP05622 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.62□□□□□ -0.39
PdgfrbP05622 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Gm6023-201ENSMUST00000118217 606 ntBASIC12.62□□□□□ -0.39
PdgfrbP05622 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 AY702102-202ENSMUST00000194651 1173 ntBASIC12.62□□□□□ -0.39
PdgfrbP05622 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.62□□□□□ -0.39
PdgfrbP05622 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.62□□□□□ -0.39
PdgfrbP05622 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.62□□□□□ -0.39
PdgfrbP05622 Gm9823-201ENSMUST00000051212 327 ntBASIC12.62□□□□□ -0.39
PdgfrbP05622 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdgfrbP05622 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfrbP05622 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms