Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.1□□□□□ -0.79
P04940 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.1□□□□□ -0.79
P04940 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
P04940 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.1□□□□□ -0.79
P04940 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.1□□□□□ -0.79
P04940 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.1□□□□□ -0.79
P04940 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.1□□□□□ -0.79
P04940 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04940 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.09□□□□□ -0.79
P04940 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.09□□□□□ -0.79
P04940 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P04940 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.09□□□□□ -0.79
P04940 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm11793-201ENSMUST00000120433 981 ntBASIC10.09□□□□□ -0.79
P04940 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.09□□□□□ -0.79
P04940 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.09□□□□□ -0.79
P04940 Gm13786-201ENSMUST00000122371 333 ntBASIC10.09□□□□□ -0.79
P04940 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
P04940 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.09□□□□□ -0.79
P04940 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.09□□□□□ -0.79
P04940 Gm42937-201ENSMUST00000197360 752 ntBASIC10.09□□□□□ -0.79
P04940 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.09□□□□□ -0.79
P04940 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.09□□□□□ -0.79
P04940 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.09□□□□□ -0.79
P04940 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
P04940 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04940 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P04940 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04940 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.08□□□□□ -0.8
P04940 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04940 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04940 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04940 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04940 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.08□□□□□ -0.8
P04940 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04940 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
P04940 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04940 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
P04940 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms