Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm10179-201ENSMUST00000086233 688 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.88□□□□□ -0.35
PrnpP04925 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.88□□□□□ -0.35
PrnpP04925 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.88□□□□□ -0.35
PrnpP04925 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.88□□□□□ -0.35
PrnpP04925 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
PrnpP04925 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.88□□□□□ -0.35
PrnpP04925 Gm3332-201ENSMUST00000189337 928 ntBASIC12.88□□□□□ -0.35
PrnpP04925 Gm37246-201ENSMUST00000192665 835 ntBASIC12.88□□□□□ -0.35
PrnpP04925 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.88□□□□□ -0.35
PrnpP04925 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.88□□□□□ -0.35
PrnpP04925 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PrnpP04925 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrnpP04925 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PrnpP04925 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
PrnpP04925 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.87□□□□□ -0.35
PrnpP04925 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
PrnpP04925 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.87□□□□□ -0.35
PrnpP04925 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PrnpP04925 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
PrnpP04925 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PrnpP04925 Gm14760-201ENSMUST00000121831 999 ntBASIC12.87□□□□□ -0.35
PrnpP04925 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.87□□□□□ -0.35
PrnpP04925 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PrnpP04925 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PrnpP04925 Gm8343-201ENSMUST00000182705 994 ntBASIC12.87□□□□□ -0.35
PrnpP04925 Gm5733-201ENSMUST00000190232 939 ntBASIC12.87□□□□□ -0.35
PrnpP04925 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.87□□□□□ -0.35
PrnpP04925 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
PrnpP04925 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.87□□□□□ -0.35
PrnpP04925 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.87□□□□□ -0.35
PrnpP04925 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
PrnpP04925 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PrnpP04925 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms