Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
P04224 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.96□□□□□ -0.65
P04224 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.96□□□□□ -0.65
P04224 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.96□□□□□ -0.65
P04224 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.96□□□□□ -0.65
P04224 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P04224 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.96□□□□□ -0.65
P04224 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
P04224 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
P04224 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P04224 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
P04224 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.96□□□□□ -0.65
P04224 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
P04224 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.96□□□□□ -0.65
P04224 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Gm43094-201ENSMUST00000196549 921 ntBASIC10.96□□□□□ -0.65
P04224 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.96□□□□□ -0.65
P04224 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
P04224 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.96□□□□□ -0.65
P04224 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
P04224 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
P04224 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P04224 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.96□□□□□ -0.66
P04224 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
P04224 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.96□□□□□ -0.66
P04224 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.96□□□□□ -0.66
P04224 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
P04224 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
P04224 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.96□□□□□ -0.66
P04224 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P04224 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P04224 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
P04224 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
P04224 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
P04224 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.95□□□□□ -0.66
P04224 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.95□□□□□ -0.66
P04224 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.95□□□□□ -0.66
P04224 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Gm20445-201ENSMUST00000061905 565 ntBASIC10.95□□□□□ -0.66
P04224 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.95□□□□□ -0.66
P04224 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.95□□□□□ -0.66
P04224 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
P04224 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
P04224 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04224 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms