Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.44□□□□□ -0.9
P01739 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P01739 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.44□□□□□ -0.9
P01739 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm12363-201ENSMUST00000122250 668 ntBASIC9.44□□□□□ -0.9
P01739 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm44124-201ENSMUST00000204159 472 ntBASIC9.44□□□□□ -0.9
P01739 Gm5035-201ENSMUST00000215581 927 ntBASIC9.44□□□□□ -0.9
P01739 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.44□□□□□ -0.9
P01739 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.44□□□□□ -0.9
P01739 Gm6091-201ENSMUST00000098307 165 ntBASIC9.44□□□□□ -0.9
P01739 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.44□□□□□ -0.9
P01739 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.44□□□□□ -0.9
P01739 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.44□□□□□ -0.9
P01739 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
P01739 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P01739 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
P01739 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.44□□□□□ -0.9
P01739 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P01739 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.43□□□□□ -0.9
P01739 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P01739 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P01739 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.43□□□□□ -0.9
P01739 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
P01739 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.43□□□□□ -0.9
P01739 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.43□□□□□ -0.9
P01739 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.43□□□□□ -0.9
P01739 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.43□□□□□ -0.9
P01739 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.43□□□□□ -0.9
P01739 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.43□□□□□ -0.9
P01739 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.43□□□□□ -0.9
P01739 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Gm29649-201ENSMUST00000185649 419 ntBASIC9.43□□□□□ -0.9
P01739 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.43□□□□□ -0.9
P01739 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P01739 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01739 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms