Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vti1aO89116 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Vti1aO89116 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vti1aO89116 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Vti1aO89116 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm14028-201ENSMUST00000117434 479 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm12058-201ENSMUST00000118614 437 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm11434-201ENSMUST00000122379 629 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm13570-201ENSMUST00000140763 309 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Vti1aO89116 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Vti1aO89116 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.48□□□□□ -0.25
Vti1aO89116 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vti1aO89116 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.48□□□□□ -0.25
Vti1aO89116 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.47□□□□□ -0.25
Vti1aO89116 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vti1aO89116 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vti1aO89116 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Vti1aO89116 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 Gm14109-201ENSMUST00000118814 309 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Mir6979-201ENSMUST00000183927 56 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 AA914427-201ENSMUST00000193194 1166 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 Gm38092-201ENSMUST00000195600 653 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.47□□□□□ -0.25
Vti1aO89116 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.47□□□□□ -0.25
Vti1aO89116 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.47□□□□□ -0.25
Vti1aO89116 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.47□□□□□ -0.25
Vti1aO89116 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1aO89116 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vti1aO89116 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms