Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syn1O88935 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syn1O88935 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syn1O88935 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syn1O88935 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.85□□□□□ -0.35
Syn1O88935 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Gm27910-201ENSMUST00000185004 107 ntBASIC12.85□□□□□ -0.35
Syn1O88935 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.85□□□□□ -0.35
Syn1O88935 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.85□□□□□ -0.35
Syn1O88935 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.85□□□□□ -0.35
Syn1O88935 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.85□□□□□ -0.35
Syn1O88935 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.85□□□□□ -0.35
Syn1O88935 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.85□□□□□ -0.35
Syn1O88935 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.85□□□□□ -0.35
Syn1O88935 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.85□□□□□ -0.35
Syn1O88935 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syn1O88935 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.84□□□□□ -0.35
Syn1O88935 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Syn1O88935 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Gm23596-201ENSMUST00000104304 132 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Syn1O88935 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Gm14585-201ENSMUST00000120713 634 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.84□□□□□ -0.35
Syn1O88935 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.84□□□□□ -0.35
Syn1O88935 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.84□□□□□ -0.35
Syn1O88935 Gm23771-201ENSMUST00000178702 110 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.84□□□□□ -0.35
Syn1O88935 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Gm270-201ENSMUST00000223010 976 ntBASIC12.84□□□□□ -0.35
Syn1O88935 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Syn1O88935 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.84□□□□□ -0.35
Syn1O88935 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.84□□□□□ -0.35
Syn1O88935 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.84□□□□□ -0.35
Syn1O88935 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syn1O88935 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.83□□□□□ -0.35
Syn1O88935 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Syn1O88935 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Syn1O88935 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Syn1O88935 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Syn1O88935 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms