Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ClppO88696 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ClppO88696 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.26□□□□□ -0.45
ClppO88696 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ClppO88696 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.26□□□□□ -0.45
ClppO88696 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Mir877-201ENSMUST00000104738 85 ntBASIC12.25□□□□□ -0.45
ClppO88696 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.25□□□□□ -0.45
ClppO88696 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.25□□□□□ -0.45
ClppO88696 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.25□□□□□ -0.45
ClppO88696 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.25□□□□□ -0.45
ClppO88696 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ClppO88696 Gm19931-201ENSMUST00000198920 368 ntBASIC12.25□□□□□ -0.45
ClppO88696 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.25□□□□□ -0.45
ClppO88696 Gm6334-201ENSMUST00000207083 228 ntBASIC12.25□□□□□ -0.45
ClppO88696 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.25□□□□□ -0.45
ClppO88696 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ClppO88696 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClppO88696 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ClppO88696 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ClppO88696 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ClppO88696 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.24□□□□□ -0.45
ClppO88696 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.24□□□□□ -0.45
ClppO88696 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.24□□□□□ -0.45
ClppO88696 Gm8738-201ENSMUST00000172606 329 ntBASIC12.24□□□□□ -0.45
ClppO88696 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.24□□□□□ -0.45
ClppO88696 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.24□□□□□ -0.45
ClppO88696 Gm38241-201ENSMUST00000192641 898 ntBASIC12.24□□□□□ -0.45
ClppO88696 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.24□□□□□ -0.45
ClppO88696 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Gm32025-201ENSMUST00000217960 307 ntBASIC12.24□□□□□ -0.45
ClppO88696 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ClppO88696 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms