Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Gm13408-201ENSMUST00000119822 798 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Gm13935-201ENSMUST00000121859 798 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.97□□□□□ -0.33
Ttc3O88196 Gm9550-201ENSMUST00000161130 862 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Gm17391-201ENSMUST00000171036 126 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ttc3O88196 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Gm42997-202ENSMUST00000200321 985 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ttc3O88196 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ttc3O88196 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.97□□□□□ -0.33
Ttc3O88196 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ttc3O88196 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.97□□□□□ -0.33
Ttc3O88196 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ttc3O88196 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.96□□□□□ -0.33
Ttc3O88196 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.96□□□□□ -0.33
Ttc3O88196 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ttc3O88196 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12616-201ENSMUST00000118594 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Rprl1-201ENSMUST00000158050 327 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12624-201ENSMUST00000177615 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12621-201ENSMUST00000177760 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12615-201ENSMUST00000177970 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12622-201ENSMUST00000177975 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12627-201ENSMUST00000178412 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12625-201ENSMUST00000179122 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12614-201ENSMUST00000179586 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm12613-201ENSMUST00000180323 382 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Gm45770-201ENSMUST00000212105 616 ntBASIC12.96□□□□□ -0.33
Ttc3O88196 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Ttc3O88196 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.96□□□□□ -0.33
Ttc3O88196 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ttc3O88196 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ttc3O88196 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ttc3O88196 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ttc3O88196 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Gm14247-201ENSMUST00000120950 237 ntBASIC12.96□□□□□ -0.34
Ttc3O88196 Gm12164-201ENSMUST00000121695 551 ntBASIC12.96□□□□□ -0.34
Ttc3O88196 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.96□□□□□ -0.34
Ttc3O88196 Gm44126-201ENSMUST00000204831 514 ntBASIC12.96□□□□□ -0.34
Ttc3O88196 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.96□□□□□ -0.34
Ttc3O88196 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ttc3O88196 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.96□□□□□ -0.34
Ttc3O88196 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ttc3O88196 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.95□□□□□ -0.34
Ttc3O88196 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ttc3O88196 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm28071-201ENSMUST00000190355 478 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.95□□□□□ -0.34
Ttc3O88196 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ttc3O88196 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms