Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.67■□□□□ 0.1
Vamp4O70480 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.67■□□□□ 0.1
Vamp4O70480 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.67■□□□□ 0.1
Vamp4O70480 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vamp4O70480 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.67■□□□□ 0.1
Vamp4O70480 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vamp4O70480 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vamp4O70480 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vamp4O70480 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vamp4O70480 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.66■□□□□ 0.1
Vamp4O70480 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.66■□□□□ 0.1
Vamp4O70480 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.66■□□□□ 0.1
Vamp4O70480 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vamp4O70480 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vamp4O70480 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm25700-201ENSMUST00000177693 110 ntBASIC15.66■□□□□ 0.1
Vamp4O70480 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm45224-201ENSMUST00000208203 414 ntBASIC15.66■□□□□ 0.1
Vamp4O70480 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.66■□□□□ 0.1
Vamp4O70480 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.66■□□□□ 0.1
Vamp4O70480 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vamp4O70480 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.66■□□□□ 0.1
Vamp4O70480 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vamp4O70480 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.65■□□□□ 0.1
Vamp4O70480 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.65■□□□□ 0.1
Vamp4O70480 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.65■□□□□ 0.1
Vamp4O70480 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.65■□□□□ 0.1
Vamp4O70480 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.65■□□□□ 0.1
Vamp4O70480 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.65■□□□□ 0.1
Vamp4O70480 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vamp4O70480 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Vamp4O70480 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.64■□□□□ 0.09
Vamp4O70480 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.64■□□□□ 0.09
Vamp4O70480 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vamp4O70480 Mir877-201ENSMUST00000104738 85 ntBASIC15.64■□□□□ 0.09
Vamp4O70480 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms