Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Gm15198-201ENSMUST00000117283 177 ntBASIC12.35□□□□□ -0.43
Pdlim1O70400 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Gm27516-201ENSMUST00000184237 98 ntBASIC12.35□□□□□ -0.43
Pdlim1O70400 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Gm6621-201ENSMUST00000193251 772 ntBASIC12.35□□□□□ -0.43
Pdlim1O70400 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim1O70400 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.35□□□□□ -0.43
Pdlim1O70400 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim1O70400 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Gm14726-201ENSMUST00000120623 896 ntBASIC12.34□□□□□ -0.43
Pdlim1O70400 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.34□□□□□ -0.43
Pdlim1O70400 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Pdlim1O70400 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.34□□□□□ -0.43
Pdlim1O70400 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.34□□□□□ -0.43
Pdlim1O70400 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.34□□□□□ -0.43
Pdlim1O70400 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.34□□□□□ -0.43
Pdlim1O70400 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim1O70400 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms