Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cxcl13O55038 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.55□□□□□ -0.72
Cxcl13O55038 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.54□□□□□ -0.72
Cxcl13O55038 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Gm4909-201ENSMUST00000118749 794 ntBASIC10.54□□□□□ -0.72
Cxcl13O55038 Gm12217-201ENSMUST00000118858 696 ntBASIC10.54□□□□□ -0.72
Cxcl13O55038 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cxcl13O55038 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Mir6927-201ENSMUST00000184494 71 ntBASIC10.54□□□□□ -0.72
Cxcl13O55038 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.54□□□□□ -0.72
Cxcl13O55038 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Gm18753-201ENSMUST00000201000 566 ntBASIC10.54□□□□□ -0.72
Cxcl13O55038 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.54□□□□□ -0.72
Cxcl13O55038 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.54□□□□□ -0.72
Cxcl13O55038 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.54□□□□□ -0.72
Cxcl13O55038 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cxcl13O55038 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cxcl13O55038 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cxcl13O55038 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.53□□□□□ -0.72
Cxcl13O55038 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.53□□□□□ -0.72
Cxcl13O55038 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm24749-201ENSMUST00000157838 343 ntBASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm28450-201ENSMUST00000187349 638 ntBASIC10.53□□□□□ -0.72
Cxcl13O55038 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.53□□□□□ -0.72
Cxcl13O55038 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.53□□□□□ -0.72
Cxcl13O55038 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms