Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mir6392-201ENSMUST00000184924 108 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Mir7654-201ENSMUST00000185082 70 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.86□□□□□ -0.83
Efnb3O35393 Gm28693-202ENSMUST00000190758 331 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Gm44397-201ENSMUST00000195950 113 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Gm6983-201ENSMUST00000214912 628 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.86□□□□□ -0.83
Efnb3O35393 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Efnb3O35393 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Efnb3O35393 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.86□□□□□ -0.83
Efnb3O35393 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Efnb3O35393 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Efnb3O35393 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.85□□□□□ -0.83
Efnb3O35393 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.85□□□□□ -0.83
Efnb3O35393 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.85□□□□□ -0.83
Efnb3O35393 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Efnb3O35393 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.85□□□□□ -0.83
Efnb3O35393 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Efnb3O35393 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.85□□□□□ -0.83
Efnb3O35393 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms