Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13□□□□□ -0.33
Ebf3O08791 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ebf3O08791 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf3O08791 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ebf3O08791 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm13736-201ENSMUST00000119272 253 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ebf3O08791 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Gm37201-201ENSMUST00000191845 523 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ebf3O08791 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf3O08791 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf3O08791 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.99□□□□□ -0.33
Ebf3O08791 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Ebf3O08791 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ebf3O08791 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ebf3O08791 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf3O08791 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ebf3O08791 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ebf3O08791 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Gm12291-201ENSMUST00000121627 311 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf3O08791 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ebf3O08791 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf3O08791 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf3O08791 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.98□□□□□ -0.33
Ebf3O08791 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.98□□□□□ -0.33
Ebf3O08791 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ebf3O08791 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf3O08791 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf3O08791 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf3O08791 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ebf3O08791 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.97□□□□□ -0.33
Ebf3O08791 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Ebf3O08791 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf3O08791 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf3O08791 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ebf3O08791 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf3O08791 Gm7857-201ENSMUST00000117957 358 ntBASIC12.97□□□□□ -0.33
Ebf3O08791 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms