Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
AlyrefO08583 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AlyrefO08583 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Gm14274-201ENSMUST00000117182 615 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Gm12218-201ENSMUST00000117666 399 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Gm11783-201ENSMUST00000119549 885 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Gm11941-201ENSMUST00000119904 610 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Gm28071-201ENSMUST00000190355 478 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.7□□□□□ -0.38
AlyrefO08583 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AlyrefO08583 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
AlyrefO08583 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
AlyrefO08583 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
AlyrefO08583 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.69□□□□□ -0.38
AlyrefO08583 Gm11246-201ENSMUST00000120880 345 ntBASIC12.69□□□□□ -0.38
AlyrefO08583 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.69□□□□□ -0.38
AlyrefO08583 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.69□□□□□ -0.38
AlyrefO08583 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.69□□□□□ -0.38
AlyrefO08583 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.69□□□□□ -0.38
AlyrefO08583 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AlyrefO08583 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.68□□□□□ -0.38
AlyrefO08583 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.68□□□□□ -0.38
AlyrefO08583 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AlyrefO08583 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AlyrefO08583 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.68□□□□□ -0.38
AlyrefO08583 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.68□□□□□ -0.38
AlyrefO08583 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.68□□□□□ -0.38
AlyrefO08583 Gm15573-201ENSMUST00000119487 540 ntBASIC12.68□□□□□ -0.38
AlyrefO08583 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.68□□□□□ -0.38
AlyrefO08583 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.68□□□□□ -0.38
AlyrefO08583 Gm8584-201ENSMUST00000171982 758 ntBASIC12.68□□□□□ -0.38
AlyrefO08583 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Trav11n-201ENSMUST00000200113 343 ntBASIC12.68□□□□□ -0.38
AlyrefO08583 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.68□□□□□ -0.38
AlyrefO08583 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AlyrefO08583 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
AlyrefO08583 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms