Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.36□□□□□ -0.59
Shisa8J3QNX5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shisa8J3QNX5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm25927-201ENSMUST00000175058 117 ntBASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Gm16372-201ENSMUST00000073088 450 ntBASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Shisa8J3QNX5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms