Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.72□□□□□ -0.53
Colca2F8VPY8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Colca2F8VPY8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.71□□□□□ -0.53
Colca2F8VPY8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm15207-201ENSMUST00000119259 442 ntBASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm14219-201ENSMUST00000120414 288 ntBASIC11.71□□□□□ -0.53
Colca2F8VPY8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm45120-201ENSMUST00000208880 408 ntBASIC11.71□□□□□ -0.53
Colca2F8VPY8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Colca2F8VPY8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.71□□□□□ -0.54
Colca2F8VPY8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.71□□□□□ -0.54
Colca2F8VPY8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Colca2F8VPY8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Colca2F8VPY8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Colca2F8VPY8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm11801-201ENSMUST00000117807 746 ntBASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm5419-201ENSMUST00000119301 527 ntBASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm14942-201ENSMUST00000119642 336 ntBASIC11.7□□□□□ -0.54
Colca2F8VPY8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.7□□□□□ -0.54
Colca2F8VPY8 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms