Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm15236-201ENSMUST00000117309 379 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm13665-201ENSMUST00000120830 528 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Rprl1-202ENSMUST00000198476 238 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm18056-201ENSMUST00000207670 568 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm18061-201ENSMUST00000208350 562 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm18063-201ENSMUST00000208529 568 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm18052-201ENSMUST00000208750 559 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.63□□□□□ -0.07
Pcdhb9E9Q5G2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm44882-201ENSMUST00000205702 802 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm44651-201ENSMUST00000207343 372 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm45224-201ENSMUST00000208203 414 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb9E9Q5G2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms