Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm14109-201ENSMUST00000118814 309 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm8018-201ENSMUST00000173536 789 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm3096-201ENSMUST00000185770 364 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm8885-201ENSMUST00000189382 598 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm37201-201ENSMUST00000191845 523 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdh17E9PXF0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh17E9PXF0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh17E9PXF0 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.65□□□□□ -0.55
Pcdh17E9PXF0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh17E9PXF0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh17E9PXF0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.65□□□□□ -0.55
Pcdh17E9PXF0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm13665-201ENSMUST00000120830 528 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm8712-201ENSMUST00000221090 701 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh17E9PXF0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh17E9PXF0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms