Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Gm7857-201ENSMUST00000117957 358 ntBASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Gm12217-201ENSMUST00000118858 696 ntBASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Mir6927-201ENSMUST00000184494 71 ntBASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Gm45224-201ENSMUST00000208203 414 ntBASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Srp54bE9PXC0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Mir5120-201ENSMUST00000175020 78 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm32999-201ENSMUST00000192693 562 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm8913-201ENSMUST00000209491 641 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Nsd1-205ENSMUST00000224693 852 ntBASIC12.32□□□□□ -0.44
Srp54bE9PXC0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.32□□□□□ -0.44
Srp54bE9PXC0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Gm28450-201ENSMUST00000187349 638 ntBASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Srp54bE9PXC0 Gm45433-201ENSMUST00000209386 247 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms