Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm27530-201ENSMUST00000184096 98 ntBASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm18038-201ENSMUST00000197900 485 ntBASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm19931-201ENSMUST00000198920 368 ntBASIC11.18□□□□□ -0.62
Shank1D3YZU1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.18□□□□□ -0.62
Shank1D3YZU1 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.18□□□□□ -0.62
Shank1D3YZU1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gm10076-201ENSMUST00000073238 384 ntBASIC11.18□□□□□ -0.62
Shank1D3YZU1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shank1D3YZU1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm23251-201ENSMUST00000103773 110 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm19287-201ENSMUST00000203190 358 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm43962-201ENSMUST00000203898 190 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.17□□□□□ -0.62
Shank1D3YZU1 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shank1D3YZU1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms