Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pnldc1B2RXZ1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Cog3-203ENSMUST00000227473 4197 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm15236-201ENSMUST00000117309 379 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm38241-201ENSMUST00000192641 898 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm4857-201ENSMUST00000192718 785 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm38341-201ENSMUST00000195357 515 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm18584-201ENSMUST00000203098 964 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gm24526-201ENSMUST00000082921 158 ntBASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pnldc1B2RXZ1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm11591-201ENSMUST00000120063 702 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm6222-202ENSMUST00000182143 629 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm5904-201ENSMUST00000210286 865 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Cts7-204ENSMUST00000225321 1257 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pnldc1B2RXZ1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms